Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 AC023824.1-201ENST00000562945 2975 ntBASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 AC007326.2-201ENST00000624224 7579 ntBASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 AL158070.2-201ENST00000623713 1621 ntBASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 AC093525.8-201ENST00000624099 1342 ntBASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PTCHD1Q96NR3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 AC012441.1-201ENST00000446669 685 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 AL355864.2-201ENST00000447420 863 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 AC022137.2-201ENST00000503482 481 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 AC233724.13-201ENST00000598383 410 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 AL022328.1-201ENST00000610050 478 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 MSTO2P-201ENST00000314835 1709 ntBASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTCHD1Q96NR3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 AL645937.2-201ENST00000396808 931 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 U91328.1-201ENST00000437528 223 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 BCRP2-202ENST00000447763 634 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 AC114812.1-204ENST00000449669 728 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 USP32P1-208ENST00000506594 1164 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 BCRP6-201ENST00000510112 632 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 BCRP7-201ENST00000511549 544 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 KRT17P8-201ENST00000540749 863 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 AL162274.1-201ENST00000617191 1098 ntBASIC14.39□□□□□ -0.11
PTCHD1Q96NR3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms