Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AC026410.3-201ENST00000514280 936 ntBASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AL355385.1-201ENST00000606123 409 ntBASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AC007326.2-201ENST00000624224 7579 ntBASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 AC106881.1-201ENST00000605849 3329 ntBASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 MIR661-201ENST00000384842 89 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AL691447.1-201ENST00000419456 387 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 RN7SL718P-201ENST00000581254 303 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 RN7SL204P-201ENST00000582831 262 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AL132655.2-201ENST00000596276 594 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC107373.2-201ENST00000607735 490 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC097376.2-205ENST00000610159 5334 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AC007787.1-201ENST00000588095 1583 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AL136379.1-201ENST00000623471 2642 ntBASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC116Q8IYX3 AL138799.1-201ENST00000448213 1675 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 CICP23-201ENST00000605013 2741 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 AC236430.1-201ENST00000402231 743 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 DFFBP1-201ENST00000433250 979 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 FAM207CP-201ENST00000443486 507 ntBASIC14.42□□□□□ -0.1
CCDC116Q8IYX3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms