Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPAS4Q8IUM7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC092850.2-201ENST00000623821 2697 ntBASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC006058.4-201ENST00000624016 1670 ntBASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC103988.2-201ENST00000561804 725 ntBASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AL359258.3-201ENST00000622910 2331 ntBASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AL008718.2-201ENST00000609206 1313 ntBASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.15■□□□□ 0.18
NPAS4Q8IUM7 AC244394.1-201ENST00000435000 1665 ntBASIC16.14■□□□□ 0.18
NPAS4Q8IUM7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NPAS4Q8IUM7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
NPAS4Q8IUM7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.14■□□□□ 0.18
NPAS4Q8IUM7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NPAS4Q8IUM7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
NPAS4Q8IUM7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPAS4Q8IUM7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms