Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AC104982.3-201ENST00000581995 514 ntBASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AC073413.1-201ENST00000603927 732 ntBASIC16.96■□□□□ 0.31
TRIM50Q86XT4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM50Q86XT4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.95■□□□□ 0.3
TRIM50Q86XT4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 BCYRN1-201ENST00000418539 200 ntBASIC16.95■□□□□ 0.3
TRIM50Q86XT4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AC026434.2-201ENST00000506094 1078 ntBASIC16.95■□□□□ 0.3
TRIM50Q86XT4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 PPY2P-201ENST00000582808 702 ntBASIC16.95■□□□□ 0.3
TRIM50Q86XT4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AL022328.3-201ENST00000607943 679 ntBASIC16.95■□□□□ 0.3
TRIM50Q86XT4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM50Q86XT4 AC067930.6-201ENST00000623257 4947 ntBASIC16.94■□□□□ 0.3
TRIM50Q86XT4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 KRT8P4-201ENST00000509735 1454 ntBASIC16.94■□□□□ 0.3
TRIM50Q86XT4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AC132872.4-202ENST00000622924 2756 ntBASIC16.94■□□□□ 0.3
TRIM50Q86XT4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM50Q86XT4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms