Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 AC026434.2-201ENST00000506094 1078 ntBASIC12.95□□□□□ -0.34
LRRK2Q5S007 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 MIR5001-201ENST00000580185 100 ntBASIC12.95□□□□□ -0.34
LRRK2Q5S007 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 PSME2-217ENST00000615264 874 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 PSME2-218ENST00000630027 185 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 AC092364.2-201ENST00000596710 2692 ntBASIC12.95□□□□□ -0.34
LRRK2Q5S007 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 MIR1301-201ENST00000408518 82 ntBASIC12.95□□□□□ -0.34
LRRK2Q5S007 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 AC226150.1-201ENST00000544259 466 ntBASIC12.95□□□□□ -0.34
LRRK2Q5S007 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LRRK2Q5S007 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LRRK2Q5S007 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 WASH7P-201ENST00000488147 1351 ntBASIC12.94□□□□□ -0.34
LRRK2Q5S007 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PRAL-201ENST00000624952 3286 ntBASIC12.94□□□□□ -0.34
LRRK2Q5S007 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.94□□□□□ -0.34
LRRK2Q5S007 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ACTG1P19-201ENST00000418987 1116 ntBASIC12.94□□□□□ -0.34
LRRK2Q5S007 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 HCG18-241ENST00000602290 821 ntTSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 AC006483.2-201ENST00000609813 515 ntBASIC12.94□□□□□ -0.34
LRRK2Q5S007 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LRRK2Q5S007 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LRRK2Q5S007 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms