Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.79■□□□□ 0.76
COL16A1Q07092 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.79■□□□□ 0.76
COL16A1Q07092 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 AC023090.2-201ENST00000625182 2110 ntBASIC19.79■□□□□ 0.76
COL16A1Q07092 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.79■□□□□ 0.76
COL16A1Q07092 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL16A1Q07092 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
COL16A1Q07092 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.78■□□□□ 0.76
COL16A1Q07092 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.78■□□□□ 0.76
COL16A1Q07092 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.78■□□□□ 0.76
COL16A1Q07092 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 SALL4P5-201ENST00000419001 1760 ntBASIC19.78■□□□□ 0.76
COL16A1Q07092 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 AL157823.1-201ENST00000403727 628 ntBASIC19.78■□□□□ 0.76
COL16A1Q07092 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.78■□□□□ 0.76
COL16A1Q07092 ST13P19-201ENST00000442505 1124 ntBASIC19.78■□□□□ 0.76
COL16A1Q07092 AC090136.2-201ENST00000517809 420 ntBASIC19.78■□□□□ 0.76
COL16A1Q07092 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.78■□□□□ 0.76
COL16A1Q07092 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.78■□□□□ 0.76
COL16A1Q07092 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC19.78■□□□□ 0.76
COL16A1Q07092 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.78■□□□□ 0.76
COL16A1Q07092 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
COL16A1Q07092 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL16A1Q07092 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 AP002353.1-201ENST00000528257 1599 ntBASIC19.77■□□□□ 0.76
COL16A1Q07092 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL16A1Q07092 AC027612.2-202ENST00000445955 1199 ntBASIC19.77■□□□□ 0.76
COL16A1Q07092 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC19.77■□□□□ 0.76
COL16A1Q07092 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 NT5C-204ENST00000578337 582 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL16A1Q07092 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.77■□□□□ 0.76
COL16A1Q07092 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL16A1Q07092 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL16A1Q07092 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COL16A1Q07092 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COL16A1Q07092 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 AC008026.2-201ENST00000495438 348 ntBASIC19.76■□□□□ 0.75
COL16A1Q07092 SEPHS2P1-201ENST00000511618 1162 ntBASIC19.76■□□□□ 0.75
COL16A1Q07092 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.76■□□□□ 0.75
COL16A1Q07092 AC084262.1-201ENST00000567818 751 ntBASIC19.76■□□□□ 0.75
COL16A1Q07092 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COL16A1Q07092 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC19.76■□□□□ 0.75
COL16A1Q07092 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.76■□□□□ 0.75
COL16A1Q07092 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.76■□□□□ 0.75
COL16A1Q07092 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.76■□□□□ 0.75
COL16A1Q07092 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL16A1Q07092 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.76■□□□□ 0.75
COL16A1Q07092 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL16A1Q07092 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms