Protein–RNA interactions for Protein: Q01628

IFITM3, Interferon-induced transmembrane protein 3, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3Q01628 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.19□□□□□ -0.3
IFITM3Q01628 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.19□□□□□ -0.3
IFITM3Q01628 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.19□□□□□ -0.3
IFITM3Q01628 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 KRT18P34-201ENST00000488218 1270 ntBASIC13.19□□□□□ -0.3
IFITM3Q01628 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFITM3Q01628 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFITM3Q01628 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.19□□□□□ -0.3
IFITM3Q01628 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
IFITM3Q01628 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.19□□□□□ -0.3
IFITM3Q01628 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFITM3Q01628 KRT8P37-201ENST00000451609 1420 ntBASIC13.19□□□□□ -0.3
IFITM3Q01628 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFITM3Q01628 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IFITM3Q01628 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.19□□□□□ -0.3
IFITM3Q01628 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.19□□□□□ -0.3
IFITM3Q01628 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.19□□□□□ -0.3
IFITM3Q01628 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
IFITM3Q01628 AC107375.1-201ENST00000564464 2231 ntBASIC13.19□□□□□ -0.3
IFITM3Q01628 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
IFITM3Q01628 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 PCDHA6-201ENST00000378126 3267 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 TSPY5P-201ENST00000426936 936 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.18□□□□□ -0.3
IFITM3Q01628 KRT17P6-201ENST00000453795 1220 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 AC061975.2-201ENST00000581722 295 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.18□□□□□ -0.3
IFITM3Q01628 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 AC012531.1-201ENST00000562848 2680 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 LILRP1-201ENST00000444199 1370 ntBASIC13.18□□□□□ -0.3
IFITM3Q01628 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFITM3Q01628 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFITM3Q01628 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFITM3Q01628 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms