Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 TSPY16P-201ENST00000449843 468 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AC104596.2-201ENST00000512793 793 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AC092552.1-201ENST00000547243 906 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AC124283.3-201ENST00000570869 594 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 TMEM261P1-201ENST00000604899 340 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 AL157414.3-201ENST00000624276 1954 ntBASIC13.34□□□□□ -0.27
HIST1H3AP68431 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H3AP68431 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H3AP68431 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
HIST1H3AP68431 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
HIST1H3AP68431 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
HIST1H3AP68431 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H3AP68431 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 KRT8P22-201ENST00000562317 1415 ntBASIC13.33□□□□□ -0.28
HIST1H3AP68431 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 AC007431.3-201ENST00000623221 587 ntBASIC13.33□□□□□ -0.28
HIST1H3AP68431 BX539320.1-201ENST00000623759 877 ntBASIC13.33□□□□□ -0.28
HIST1H3AP68431 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H3AP68431 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H3AP68431 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms