Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 KRT8P37-201ENST00000451609 1420 ntBASIC14.45□□□□□ -0.1
CLK1P49759 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.45□□□□□ -0.1
CLK1P49759 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.45□□□□□ -0.1
CLK1P49759 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 BNIP3P1-202ENST00000550043 1585 ntBASIC14.45□□□□□ -0.1
CLK1P49759 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.45□□□□□ -0.1
CLK1P49759 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 AL137784.3-201ENST00000623858 2288 ntBASIC14.45□□□□□ -0.1
CLK1P49759 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLK1P49759 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CLK1P49759 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.45□□□□□ -0.1
CLK1P49759 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CLK1P49759 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 BANF1P1-201ENST00000553684 263 ntBASIC14.44□□□□□ -0.1
CLK1P49759 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 AL731571.1-201ENST00000617058 5428 ntBASIC14.44□□□□□ -0.1
CLK1P49759 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLK1P49759 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CLK1P49759 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLK1P49759 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLK1P49759 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLK1P49759 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.43□□□□□ -0.1
CLK1P49759 TUBB3P1-201ENST00000405796 1332 ntBASIC14.43□□□□□ -0.1
CLK1P49759 KRT18P28-201ENST00000453838 1332 ntBASIC14.43□□□□□ -0.1
CLK1P49759 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLK1P49759 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms