Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 AP001005.1-201ENST00000571755 1248 ntBASIC12.56□□□□□ -0.4
NKX2-1P43699 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX2-1P43699 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 AC138969.3-201ENST00000546612 1459 ntBASIC12.56□□□□□ -0.4
NKX2-1P43699 AC138932.2-201ENST00000548268 1459 ntBASIC12.56□□□□□ -0.4
NKX2-1P43699 AC126755.4-201ENST00000549796 1459 ntBASIC12.56□□□□□ -0.4
NKX2-1P43699 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.56□□□□□ -0.4
NKX2-1P43699 AL731571.1-201ENST00000617058 5428 ntBASIC12.56□□□□□ -0.4
NKX2-1P43699 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX2-1P43699 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX2-1P43699 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.56□□□□□ -0.4
NKX2-1P43699 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX2-1P43699 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX2-1P43699 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 AC098831.1-202ENST00000438821 336 ntBASIC12.55□□□□□ -0.4
NKX2-1P43699 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX2-1P43699 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.55□□□□□ -0.4
NKX2-1P43699 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.55□□□□□ -0.4
NKX2-1P43699 RARRES2P8-201ENST00000566335 367 ntBASIC12.55□□□□□ -0.4
NKX2-1P43699 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX2-1P43699 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.55□□□□□ -0.4
NKX2-1P43699 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.55□□□□□ -0.4
NKX2-1P43699 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX2-1P43699 AC068137.2-201ENST00000605408 478 ntBASIC12.55□□□□□ -0.4
NKX2-1P43699 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 AC004877.2-201ENST00000623941 599 ntBASIC12.55□□□□□ -0.4
NKX2-1P43699 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NKX2-1P43699 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-1P43699 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-1P43699 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-1P43699 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-1P43699 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-1P43699 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-1P43699 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-1P43699 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-1P43699 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-1P43699 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NKX2-1P43699 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-1P43699 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms