Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 AC012508.2-201ENST00000567613 1472 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIK1P39086 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GRIK1P39086 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.06■□□□□ 0.16
GRIK1P39086 HLA-K-203ENST00000430151 1046 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 YBX1P6-201ENST00000442962 1002 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 ECM1P1-201ENST00000604092 1279 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 ENPP7P14-201ENST00000621765 1040 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 AL033527.4-201ENST00000641026 673 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GRIK1P39086 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
GRIK1P39086 AC023024.2-201ENST00000623561 1993 ntBASIC16.06■□□□□ 0.16
GRIK1P39086 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GRIK1P39086 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 AC055811.4-201ENST00000624039 1754 ntBASIC16.05■□□□□ 0.16
GRIK1P39086 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.05■□□□□ 0.16
GRIK1P39086 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GRIK1P39086 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.05■□□□□ 0.16
GRIK1P39086 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
GRIK1P39086 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.05■□□□□ 0.16
GRIK1P39086 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GRIK1P39086 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.05■□□□□ 0.16
GRIK1P39086 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.05■□□□□ 0.16
GRIK1P39086 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.05■□□□□ 0.16
GRIK1P39086 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.05■□□□□ 0.16
GRIK1P39086 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 AL583810.1-201ENST00000553344 1045 ntBASIC16.05■□□□□ 0.16
GRIK1P39086 AC008687.7-202ENST00000637404 953 ntBASIC16.05■□□□□ 0.16
GRIK1P39086 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
GRIK1P39086 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.05■□□□□ 0.16
GRIK1P39086 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GRIK1P39086 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GRIK1P39086 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GRIK1P39086 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.04■□□□□ 0.16
GRIK1P39086 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIK1P39086 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIK1P39086 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIK1P39086 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
GRIK1P39086 AC105917.1-201ENST00000506637 2539 ntBASIC16.04■□□□□ 0.16
GRIK1P39086 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIK1P39086 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIK1P39086 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GRIK1P39086 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIK1P39086 AHCYP2-201ENST00000430630 1300 ntBASIC16.04■□□□□ 0.16
GRIK1P39086 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GRIK1P39086 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.04■□□□□ 0.16
GRIK1P39086 MIR1202-201ENST00000408529 83 ntBASIC16.04■□□□□ 0.16
GRIK1P39086 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.04■□□□□ 0.16
GRIK1P39086 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.04■□□□□ 0.16
GRIK1P39086 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GRIK1P39086 RNA5SP412-201ENST00000516234 123 ntBASIC16.04■□□□□ 0.16
GRIK1P39086 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms