Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 AL645937.2-201ENST00000396808 931 ntBASIC14.67□□□□□ -0.06
PTX3P26022 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.67□□□□□ -0.06
PTX3P26022 DFFBP1-201ENST00000433250 979 ntBASIC14.67□□□□□ -0.06
PTX3P26022 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.67□□□□□ -0.06
PTX3P26022 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.67□□□□□ -0.06
PTX3P26022 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.67□□□□□ -0.06
PTX3P26022 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.67□□□□□ -0.06
PTX3P26022 BRI3BPP1-201ENST00000594224 787 ntBASIC14.67□□□□□ -0.06
PTX3P26022 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTX3P26022 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PTX3P26022 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.67□□□□□ -0.06
PTX3P26022 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 AJ011931.1-201ENST00000618749 2492 ntBASIC14.67□□□□□ -0.06
PTX3P26022 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTX3P26022 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.67□□□□□ -0.06
PTX3P26022 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.66□□□□□ -0.06
PTX3P26022 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 AC106881.1-201ENST00000605849 3329 ntBASIC14.66□□□□□ -0.06
PTX3P26022 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
PTX3P26022 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTX3P26022 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.66□□□□□ -0.06
PTX3P26022 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PTX3P26022 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PTX3P26022 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 AC087499.6-201ENST00000411576 835 ntBASIC14.66□□□□□ -0.06
PTX3P26022 NUS1P3-201ENST00000423502 862 ntBASIC14.66□□□□□ -0.06
PTX3P26022 AC134915.1-201ENST00000426461 574 ntBASIC14.66□□□□□ -0.06
PTX3P26022 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 FAM207CP-201ENST00000443486 507 ntBASIC14.66□□□□□ -0.06
PTX3P26022 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 VDAC1P7-201ENST00000462417 847 ntBASIC14.66□□□□□ -0.06
PTX3P26022 SERBP1P5-201ENST00000510079 1181 ntBASIC14.66□□□□□ -0.06
PTX3P26022 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.66□□□□□ -0.06
PTX3P26022 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.66□□□□□ -0.06
PTX3P26022 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.66□□□□□ -0.06
PTX3P26022 AL096865.1-201ENST00000606796 927 ntBASIC14.66□□□□□ -0.06
PTX3P26022 AC107373.2-201ENST00000607735 490 ntBASIC14.66□□□□□ -0.06
PTX3P26022 AC004233.3-201ENST00000607794 1269 ntBASIC14.66□□□□□ -0.06
PTX3P26022 AC093726.1-201ENST00000608064 963 ntBASIC14.66□□□□□ -0.06
PTX3P26022 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTX3P26022 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.66□□□□□ -0.06
PTX3P26022 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
PTX3P26022 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTX3P26022 AL360270.3-201ENST00000609118 1348 ntBASIC14.66□□□□□ -0.06
PTX3P26022 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PTX3P26022 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.65□□□□□ -0.06
PTX3P26022 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.65□□□□□ -0.06
PTX3P26022 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PTX3P26022 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTX3P26022 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms