Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.06■□□□□ 0.32
GGPS1O95749 RN7SL713P-201ENST00000582127 302 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 PPY2P-201ENST00000582808 702 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.06■□□□□ 0.32
GGPS1O95749 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 AC006058.4-201ENST00000624016 1670 ntBASIC17.06■□□□□ 0.32
GGPS1O95749 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.06■□□□□ 0.32
GGPS1O95749 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GGPS1O95749 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
GGPS1O95749 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.05■□□□□ 0.32
GGPS1O95749 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 KRT8P13-201ENST00000463294 1010 ntBASIC17.05■□□□□ 0.32
GGPS1O95749 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 AC073413.1-201ENST00000603927 732 ntBASIC17.05■□□□□ 0.32
GGPS1O95749 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.05■□□□□ 0.32
GGPS1O95749 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 AC073347.1-201ENST00000421633 2643 ntBASIC17.05■□□□□ 0.32
GGPS1O95749 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.05■□□□□ 0.32
GGPS1O95749 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.05■□□□□ 0.32
GGPS1O95749 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.05■□□□□ 0.32
GGPS1O95749 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.05■□□□□ 0.32
GGPS1O95749 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GGPS1O95749 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GGPS1O95749 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 AL359258.3-201ENST00000622910 2331 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 REXO1L4P-201ENST00000605109 1937 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 CLUHP2-201ENST00000426660 1303 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.04■□□□□ 0.32
GGPS1O95749 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 BCYRN1-201ENST00000418539 200 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.04■□□□□ 0.32
GGPS1O95749 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.04■□□□□ 0.32
GGPS1O95749 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.04■□□□□ 0.32
GGPS1O95749 AC026434.2-201ENST00000506094 1078 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.04■□□□□ 0.32
GGPS1O95749 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.04■□□□□ 0.32
GGPS1O95749 AP001258.2-201ENST00000529891 490 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 AC106820.3-201ENST00000561653 397 ntBASIC17.04■□□□□ 0.32
GGPS1O95749 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms