Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SIX6O95475 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.83□□□□□ -0.36
SIX6O95475 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SIX6O95475 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SIX6O95475 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SIX6O95475 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SIX6O95475 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SIX6O95475 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.82□□□□□ -0.36
SIX6O95475 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 AC016397.2-201ENST00000624848 1985 ntBASIC12.82□□□□□ -0.36
SIX6O95475 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SIX6O95475 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 RBM17P3-201ENST00000417687 1192 ntBASIC12.82□□□□□ -0.36
SIX6O95475 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SIX6O95475 FAM185BP-201ENST00000443595 716 ntBASIC12.82□□□□□ -0.36
SIX6O95475 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.82□□□□□ -0.36
SIX6O95475 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.82□□□□□ -0.36
SIX6O95475 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.82□□□□□ -0.36
SIX6O95475 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.82□□□□□ -0.36
SIX6O95475 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 AC138894.3-201ENST00000603787 634 ntBASIC12.82□□□□□ -0.36
SIX6O95475 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SIX6O95475 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SIX6O95475 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.82□□□□□ -0.36
SIX6O95475 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.82□□□□□ -0.36
SIX6O95475 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 AC005332.1-201ENST00000577698 1310 ntBASIC12.82□□□□□ -0.36
SIX6O95475 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.82□□□□□ -0.36
SIX6O95475 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SIX6O95475 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SIX6O95475 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.81□□□□□ -0.36
SIX6O95475 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.81□□□□□ -0.36
SIX6O95475 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
SIX6O95475 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SIX6O95475 AC004987.2-201ENST00000395959 1148 ntBASIC12.81□□□□□ -0.36
SIX6O95475 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.81□□□□□ -0.36
SIX6O95475 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.81□□□□□ -0.36
SIX6O95475 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SIX6O95475 KRT16P4-201ENST00000453883 522 ntBASIC12.81□□□□□ -0.36
SIX6O95475 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.81□□□□□ -0.36
SIX6O95475 AC012615.1-201ENST00000565797 1299 ntBASIC12.81□□□□□ -0.36
SIX6O95475 AL031432.2-201ENST00000566714 459 ntBASIC12.81□□□□□ -0.36
SIX6O95475 AL928711.1-201ENST00000570165 459 ntBASIC12.81□□□□□ -0.36
SIX6O95475 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.81□□□□□ -0.36
SIX6O95475 OR7E47P-204ENST00000575924 449 ntBASIC12.81□□□□□ -0.36
SIX6O95475 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms