Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCL13O43927 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CXCL13O43927 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 AC046158.3-201ENST00000624947 2558 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CXCL13O43927 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 BOLA2P3-201ENST00000404566 256 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 C2orf27AP3-201ENST00000434123 579 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.65□□□□□ -0.22
CXCL13O43927 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.65□□□□□ -0.22
CXCL13O43927 AC022616.1-201ENST00000518688 554 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.65□□□□□ -0.22
CXCL13O43927 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.65□□□□□ -0.22
CXCL13O43927 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 AL354718.3-201ENST00000616414 581 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 CR382287.1-201ENST00000623954 586 ntBASIC13.65□□□□□ -0.22
CXCL13O43927 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.65□□□□□ -0.22
CXCL13O43927 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CXCL13O43927 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CXCL13O43927 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 PDIA3P1-201ENST00000471856 1510 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CXCL13O43927 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCL13O43927 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCL13O43927 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL13O43927 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.64□□□□□ -0.23
CXCL13O43927 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CXCL13O43927 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CXCL13O43927 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 AC091951.1-201ENST00000512854 2465 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL13O43927 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 MROH4P-201ENST00000431302 1578 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.64□□□□□ -0.23
CXCL13O43927 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 WASH3P-207ENST00000560956 1394 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CXCL13O43927 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 ARSEP1-201ENST00000420443 635 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 AC016694.1-201ENST00000434179 700 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CXCL13O43927 ATP5G2P4-201ENST00000442175 420 ntBASIC13.64□□□□□ -0.23
CXCL13O43927 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms