Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.93■□□□□ 0.14
SOX1O00570 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.93■□□□□ 0.14
SOX1O00570 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.93■□□□□ 0.14
SOX1O00570 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 AC011840.2-201ENST00000563063 1520 ntBASIC15.93■□□□□ 0.14
SOX1O00570 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.93■□□□□ 0.14
SOX1O00570 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SOX1O00570 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.92■□□□□ 0.14
SOX1O00570 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 AC006058.4-201ENST00000624016 1670 ntBASIC15.92■□□□□ 0.14
SOX1O00570 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 CYP4F23P-201ENST00000593402 1579 ntBASIC15.92■□□□□ 0.14
SOX1O00570 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.92■□□□□ 0.14
SOX1O00570 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 MIR1301-201ENST00000408518 82 ntBASIC15.92■□□□□ 0.14
SOX1O00570 RN7SL582P-201ENST00000491078 279 ntBASIC15.92■□□□□ 0.14
SOX1O00570 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC15.92■□□□□ 0.14
SOX1O00570 AC068867.1-201ENST00000559855 150 ntBASIC15.92■□□□□ 0.14
SOX1O00570 GOLGA2P7-209ENST00000560408 745 ntBASIC15.92■□□□□ 0.14
SOX1O00570 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.92■□□□□ 0.14
SOX1O00570 RN7SL357P-201ENST00000581065 298 ntBASIC15.92■□□□□ 0.14
SOX1O00570 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.92■□□□□ 0.14
SOX1O00570 AC138696.2-201ENST00000607376 223 ntBASIC15.92■□□□□ 0.14
SOX1O00570 AC090510.3-201ENST00000615831 821 ntBASIC15.92■□□□□ 0.14
SOX1O00570 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.92■□□□□ 0.14
SOX1O00570 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.92■□□□□ 0.14
SOX1O00570 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SOX1O00570 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.92■□□□□ 0.14
SOX1O00570 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SOX1O00570 AC144522.1-201ENST00000625111 1658 ntBASIC15.92■□□□□ 0.14
SOX1O00570 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.92■□□□□ 0.14
SOX1O00570 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.92■□□□□ 0.14
SOX1O00570 AC106820.2-201ENST00000563775 3264 ntBASIC15.92■□□□□ 0.14
SOX1O00570 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SOX1O00570 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SOX1O00570 RNA5SP359-201ENST00000364838 113 ntBASIC15.91■□□□□ 0.14
SOX1O00570 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.91■□□□□ 0.14
SOX1O00570 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC15.91■□□□□ 0.14
SOX1O00570 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.91■□□□□ 0.14
SOX1O00570 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC15.91■□□□□ 0.14
SOX1O00570 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 CTBP2P6-201ENST00000526402 1229 ntBASIC15.91■□□□□ 0.14
SOX1O00570 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.91■□□□□ 0.14
SOX1O00570 MIR3188-201ENST00000583494 85 ntBASIC15.91■□□□□ 0.14
SOX1O00570 MIR6746-201ENST00000620971 63 ntBASIC15.91■□□□□ 0.14
SOX1O00570 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.91■□□□□ 0.14
SOX1O00570 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SOX1O00570 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SOX1O00570 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SOX1O00570 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.91■□□□□ 0.14
SOX1O00570 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SOX1O00570 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms