Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 NUP210P1-202ENST00000504322 710 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AC134698.3-201ENST00000523880 214 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AL161670.2-201ENST00000557650 1227 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AC090164.2-201ENST00000611487 516 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 E2F3P2-201ENST00000447755 1422 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AC020910.5-201ENST00000623668 1865 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 AL359258.3-201ENST00000622910 2331 ntBASIC16.61■□□□□ 0.25
GTF2IRD1Q9UHL9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 RN7SKP230-201ENST00000365642 335 ntBASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 AL136295.7-201ENST00000619226 1200 ntBASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GTF2IRD1Q9UHL9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 FXNP2-201ENST00000411625 547 ntBASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 PUDPP3-201ENST00000445368 636 ntBASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 MAGEA5-201ENST00000446757 942 ntBASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2IRD1Q9UHL9 AC012618.1-201ENST00000461223 412 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms