Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 AC092933.1-201ENST00000393644 945 ntBASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 AP005482.1-201ENST00000563722 1273 ntBASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 AC133552.6-201ENST00000613406 534 ntBASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLIP2Q9UDT6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 RPS2P32-201ENST00000439199 892 ntBASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 CTBP2P5-201ENST00000454986 1264 ntBASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AC106760.1-201ENST00000508690 800 ntBASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 AC084364.1-201ENST00000551967 1556 ntBASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 SNX18-202ENST00000343017 3140 ntBASIC18.12■□□□□ 0.49
CLIP2Q9UDT6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 AC106881.1-201ENST00000605849 3329 ntBASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 KRT223P-202ENST00000449164 1292 ntBASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 KLF2P4-201ENST00000451959 1225 ntBASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 AC007551.1-201ENST00000457394 519 ntBASIC18.11■□□□□ 0.49
CLIP2Q9UDT6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms