Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 HLA-A-201ENST00000376802 1334 ntBASIC18.82■□□□□ 0.6
UPF2Q9HAU5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 LINC01225-203ENST00000563550 1244 ntBASIC18.82■□□□□ 0.6
UPF2Q9HAU5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF2Q9HAU5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 RPL13AP23-201ENST00000480739 586 ntBASIC18.81■□□□□ 0.6
UPF2Q9HAU5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF2Q9HAU5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC18.8■□□□□ 0.6
UPF2Q9HAU5 REXO1L4P-201ENST00000605109 1937 ntBASIC18.8■□□□□ 0.6
UPF2Q9HAU5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 ADH5P3-201ENST00000433842 1137 ntBASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SLC25A39P2-201ENST00000537614 270 ntBASIC18.8■□□□□ 0.6
UPF2Q9HAU5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 AC007787.1-201ENST00000588095 1583 ntBASIC18.8■□□□□ 0.6
UPF2Q9HAU5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
UPF2Q9HAU5 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms