Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 RRP7BP-205ENST00000566851 833 ntBASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 AC008735.3-201ENST00000596646 500 ntBASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4CQ96CF2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 KRT8P22-201ENST00000562317 1415 ntBASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 AC144831.1-201ENST00000573312 2656 ntBASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 AC134915.1-201ENST00000426461 574 ntBASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 KRT18P43-201ENST00000469825 1281 ntBASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 IGHV3-71-201ENST00000523324 359 ntBASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 KRT17P8-201ENST00000540749 863 ntBASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4CQ96CF2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 ZBED1P1-201ENST00000502364 1930 ntBASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4CQ96CF2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms