Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.06■□□□□ 0
TTC28Q96AY4 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC15.06■□□□□ 0
TTC28Q96AY4 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.06■□□□□ 0
TTC28Q96AY4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.06■□□□□ 0
TTC28Q96AY4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.06■□□□□ 0
TTC28Q96AY4 AL050341.2-201ENST00000567508 1541 ntBASIC15.06■□□□□ 0
TTC28Q96AY4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TTC28Q96AY4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.06■□□□□ 0
TTC28Q96AY4 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC28Q96AY4 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TTC28Q96AY4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC28Q96AY4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TTC28Q96AY4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC28Q96AY4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TTC28Q96AY4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.05■□□□□ 0
TTC28Q96AY4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.05■□□□□ 0
TTC28Q96AY4 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.05■□□□□ 0
TTC28Q96AY4 NAT9-204ENST00000578822 839 ntTSL 3 BASIC15.05■□□□□ 0
TTC28Q96AY4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.05■□□□□ 0
TTC28Q96AY4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
TTC28Q96AY4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
TTC28Q96AY4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TTC28Q96AY4 AC007292.2-201ENST00000593524 1812 ntBASIC15.05■□□□□ -0
TTC28Q96AY4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.05■□□□□ -0
TTC28Q96AY4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.05■□□□□ -0
TTC28Q96AY4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TTC28Q96AY4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TTC28Q96AY4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.05■□□□□ -0
TTC28Q96AY4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.05■□□□□ -0
TTC28Q96AY4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.05■□□□□ -0
TTC28Q96AY4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TTC28Q96AY4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TTC28Q96AY4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.05■□□□□ -0
TTC28Q96AY4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.05■□□□□ -0
TTC28Q96AY4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.05■□□□□ -0
TTC28Q96AY4 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.05■□□□□ -0
TTC28Q96AY4 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
TTC28Q96AY4 AC022001.3-201ENST00000606330 596 ntBASIC15.05■□□□□ -0
TTC28Q96AY4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.05■□□□□ -0
TTC28Q96AY4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC28Q96AY4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.05■□□□□ -0
TTC28Q96AY4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC15.04■□□□□ -0
TTC28Q96AY4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.04■□□□□ -0
TTC28Q96AY4 RN7SL578P-201ENST00000477781 283 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 RN7SL530P-201ENST00000485097 298 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 TPST2P1-201ENST00000564073 1102 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 AL022334.2-201ENST00000610000 484 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.04■□□□□ -0
TTC28Q96AY4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.04■□□□□ -0
TTC28Q96AY4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.04■□□□□ -0
TTC28Q96AY4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 AL360270.3-201ENST00000609118 1348 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 AL512599.1-201ENST00000430724 685 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 ABCC6P2-201ENST00000526069 590 ntBASIC15.04■□□□□ -0
TTC28Q96AY4 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.04■□□□□ -0
TTC28Q96AY4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC28Q96AY4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
TTC28Q96AY4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.03■□□□□ -0
TTC28Q96AY4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TTC28Q96AY4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms