Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SIX5Q8N196 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.67■□□□□ 0.1
SIX5Q8N196 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SIX5Q8N196 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIX5Q8N196 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.66■□□□□ 0.1
SIX5Q8N196 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 HIST2H2BB-201ENST00000449108 381 ntBASIC15.66■□□□□ 0.1
SIX5Q8N196 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 AC106794.1-201ENST00000506935 792 ntBASIC15.66■□□□□ 0.1
SIX5Q8N196 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.66■□□□□ 0.1
SIX5Q8N196 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.66■□□□□ 0.1
SIX5Q8N196 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX5Q8N196 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SIX5Q8N196 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX5Q8N196 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SIX5Q8N196 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 KRT8P29-201ENST00000420409 1371 ntBASIC15.65■□□□□ 0.1
SIX5Q8N196 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX5Q8N196 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SIX5Q8N196 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.65■□□□□ 0.1
SIX5Q8N196 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.65■□□□□ 0.1
SIX5Q8N196 AL354877.1-201ENST00000424412 413 ntBASIC15.65■□□□□ 0.1
SIX5Q8N196 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.65■□□□□ 0.1
SIX5Q8N196 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.65■□□□□ 0.1
SIX5Q8N196 AC234782.1-201ENST00000451950 919 ntBASIC15.65■□□□□ 0.1
SIX5Q8N196 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX5Q8N196 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.65■□□□□ 0.1
SIX5Q8N196 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 AL023803.2-201ENST00000620080 638 ntBASIC15.65■□□□□ 0.1
SIX5Q8N196 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX5Q8N196 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX5Q8N196 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
SIX5Q8N196 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX5Q8N196 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SIX5Q8N196 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
SIX5Q8N196 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SIX5Q8N196 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
SIX5Q8N196 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms