Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AP000845.1-201ENST00000581677 2131 ntBASIC12.76□□□□□ -0.37
ZNF546Q86UE3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 FGFR3P6-201ENST00000457012 610 ntBASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 FOSL1P1-201ENST00000511041 816 ntBASIC12.76□□□□□ -0.37
ZNF546Q86UE3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AL031055.1-201ENST00000606362 631 ntBASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF546Q86UE3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 TPT1P11-201ENST00000458482 498 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC138969.3-201ENST00000546612 1459 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC138932.2-201ENST00000548268 1459 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC126755.4-201ENST00000549796 1459 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 MIR3909-201ENST00000579518 119 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.75□□□□□ -0.37
ZNF546Q86UE3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.75□□□□□ -0.37
ZNF546Q86UE3 AC083964.2-201ENST00000623988 2396 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms