Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDR2Q01850 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDR2Q01850 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDR2Q01850 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.31■□□□□ 0.2
CDR2Q01850 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.31■□□□□ 0.2
CDR2Q01850 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDR2Q01850 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.31■□□□□ 0.2
CDR2Q01850 AL353779.1-201ENST00000434793 351 ntBASIC16.31■□□□□ 0.2
CDR2Q01850 GNAQP1-201ENST00000444815 1067 ntBASIC16.31■□□□□ 0.2
CDR2Q01850 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.31■□□□□ 0.2
CDR2Q01850 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.31■□□□□ 0.2
CDR2Q01850 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDR2Q01850 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.31■□□□□ 0.2
CDR2Q01850 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CDR2Q01850 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.31■□□□□ 0.2
CDR2Q01850 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDR2Q01850 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDR2Q01850 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.31■□□□□ 0.2
CDR2Q01850 AL138799.1-201ENST00000448213 1675 ntBASIC16.3■□□□□ 0.2
CDR2Q01850 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 AL365209.1-201ENST00000624418 6473 ntBASIC16.3■□□□□ 0.2
CDR2Q01850 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.3■□□□□ 0.2
CDR2Q01850 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDR2Q01850 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CDR2Q01850 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDR2Q01850 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.3■□□□□ 0.2
CDR2Q01850 UGT1A2P-201ENST00000454886 866 ntBASIC16.3■□□□□ 0.2
CDR2Q01850 VDAC1P7-201ENST00000462417 847 ntBASIC16.3■□□□□ 0.2
CDR2Q01850 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.3■□□□□ 0.2
CDR2Q01850 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.3■□□□□ 0.2
CDR2Q01850 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.3■□□□□ 0.2
CDR2Q01850 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.3■□□□□ 0.2
CDR2Q01850 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CDR2Q01850 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 AC232323.1-201ENST00000540724 2099 ntBASIC16.3■□□□□ 0.2
CDR2Q01850 REXO1L5P-201ENST00000622260 2098 ntBASIC16.3■□□□□ 0.2
CDR2Q01850 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDR2Q01850 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 AL157414.3-201ENST00000624276 1954 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.29■□□□□ 0.2
CDR2Q01850 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 RPL13AP25-201ENST00000484130 612 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 INGX-202ENST00000489074 768 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 AC093004.1-201ENST00000508850 424 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CDR2Q01850 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.29■□□□□ 0.2
CDR2Q01850 BRI3BPP1-201ENST00000594224 787 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms