Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 AC112693.3-201ENST00000624819 1983 ntBASIC14.53□□□□□ -0.08
SKP1P63208 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.53□□□□□ -0.08
SKP1P63208 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SKP1P63208 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 AC005034.1-201ENST00000426657 489 ntBASIC14.53□□□□□ -0.08
SKP1P63208 AC022137.2-201ENST00000503482 481 ntBASIC14.53□□□□□ -0.08
SKP1P63208 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SKP1P63208 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 AC068587.3-201ENST00000526613 355 ntBASIC14.53□□□□□ -0.08
SKP1P63208 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.53□□□□□ -0.08
SKP1P63208 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.53□□□□□ -0.08
SKP1P63208 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.53□□□□□ -0.08
SKP1P63208 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 AC005252.2-201ENST00000624630 1141 ntBASIC14.53□□□□□ -0.08
SKP1P63208 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
SKP1P63208 AC092053.3-201ENST00000641308 4975 ntBASIC14.53□□□□□ -0.08
SKP1P63208 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SKP1P63208 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SKP1P63208 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SKP1P63208 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SKP1P63208 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SKP1P63208 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.52□□□□□ -0.08
SKP1P63208 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
SKP1P63208 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.52□□□□□ -0.08
SKP1P63208 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SKP1P63208 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.52□□□□□ -0.08
SKP1P63208 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.52□□□□□ -0.08
SKP1P63208 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SKP1P63208 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SKP1P63208 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.52□□□□□ -0.08
SKP1P63208 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.52□□□□□ -0.08
SKP1P63208 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.52□□□□□ -0.09
SKP1P63208 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 BAATP1-201ENST00000412284 1225 ntBASIC14.52□□□□□ -0.09
SKP1P63208 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.52□□□□□ -0.09
SKP1P63208 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.52□□□□□ -0.09
SKP1P63208 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.52□□□□□ -0.09
SKP1P63208 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 GIMAP3P-201ENST00000495150 836 ntBASIC14.52□□□□□ -0.09
SKP1P63208 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 MIR5189-201ENST00000577370 114 ntBASIC14.52□□□□□ -0.09
SKP1P63208 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 PRSS30P-206ENST00000641773 873 ntBASIC14.52□□□□□ -0.09
SKP1P63208 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.52□□□□□ -0.09
SKP1P63208 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SKP1P63208 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
SKP1P63208 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SKP1P63208 AL158070.2-201ENST00000623713 1621 ntBASIC14.52□□□□□ -0.09
SKP1P63208 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SKP1P63208 MROH4P-201ENST00000431302 1578 ntBASIC14.51□□□□□ -0.09
SKP1P63208 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SKP1P63208 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
SKP1P63208 LRRC59-203ENST00000576448 1531 ntBASIC14.51□□□□□ -0.09
SKP1P63208 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms