Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP54P61011 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRP54P61011 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP54P61011 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.11■□□□□ 0.01
SRP54P61011 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SRP54P61011 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRP54P61011 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP54P61011 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 FAM197Y7-201ENST00000432892 766 ntBASIC15.1■□□□□ 0.01
SRP54P61011 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP54P61011 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP54P61011 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.1■□□□□ 0.01
SRP54P61011 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 AC148477.4-201ENST00000613430 1793 ntBASIC15.1■□□□□ 0.01
SRP54P61011 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
SRP54P61011 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SRP54P61011 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.1■□□□□ 0.01
SRP54P61011 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRP54P61011 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 AP002414.2-201ENST00000591780 3365 ntBASIC15.09■□□□□ 0.01
SRP54P61011 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.09■□□□□ 0.01
SRP54P61011 AL139094.1-201ENST00000405549 1188 ntBASIC15.09■□□□□ 0.01
SRP54P61011 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.09■□□□□ 0.01
SRP54P61011 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 AC138951.2-201ENST00000623455 1161 ntBASIC15.09■□□□□ 0.01
SRP54P61011 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.09■□□□□ 0.01
SRP54P61011 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 AC008687.7-202ENST00000637404 953 ntBASIC15.09■□□□□ 0.01
SRP54P61011 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 AL158070.2-201ENST00000623713 1621 ntBASIC15.09■□□□□ 0.01
SRP54P61011 AC009090.5-201ENST00000624886 2285 ntBASIC15.09■□□□□ 0.01
SRP54P61011 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.09■□□□□ 0.01
SRP54P61011 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SRP54P61011 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRP54P61011 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms