Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.8□□□□□ -0.2
SUMO3P55854 COX5BP8-201ENST00000416911 349 ntBASIC13.8□□□□□ -0.2
SUMO3P55854 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.8□□□□□ -0.2
SUMO3P55854 INE1-201ENST00000456273 945 ntBASIC13.8□□□□□ -0.2
SUMO3P55854 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.8□□□□□ -0.2
SUMO3P55854 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.8□□□□□ -0.2
SUMO3P55854 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 CR383656.12-201ENST00000549567 513 ntBASIC13.8□□□□□ -0.2
SUMO3P55854 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 AC105233.6-201ENST00000642093 218 ntBASIC13.8□□□□□ -0.2
SUMO3P55854 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.8□□□□□ -0.2
SUMO3P55854 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 AC144831.1-201ENST00000573312 2656 ntBASIC13.8□□□□□ -0.2
SUMO3P55854 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.8□□□□□ -0.2
SUMO3P55854 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.8□□□□□ -0.2
SUMO3P55854 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SUMO3P55854 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SUMO3P55854 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SUMO3P55854 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 AC013726.1-201ENST00000563747 2285 ntBASIC13.79□□□□□ -0.2
SUMO3P55854 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 AC005229.1-201ENST00000392885 409 ntBASIC13.79□□□□□ -0.2
SUMO3P55854 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.79□□□□□ -0.2
SUMO3P55854 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
SUMO3P55854 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 EIF3FP3-201ENST00000434851 1086 ntBASIC13.79□□□□□ -0.2
SUMO3P55854 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.79□□□□□ -0.2
SUMO3P55854 TTTY23B-201ENST00000442790 549 ntBASIC13.79□□□□□ -0.2
SUMO3P55854 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.79□□□□□ -0.2
SUMO3P55854 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 AC005225.4-201ENST00000557330 545 ntBASIC13.79□□□□□ -0.2
SUMO3P55854 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
SUMO3P55854 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SUMO3P55854 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.79□□□□□ -0.2
SUMO3P55854 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.79□□□□□ -0.2
SUMO3P55854 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SUMO3P55854 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 AC055811.4-201ENST00000624039 1754 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms