Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.08□□□□□ -0.32
CDKN1AP38936 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.08□□□□□ -0.32
CDKN1AP38936 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 CICP13-201ENST00000422015 2789 ntBASIC13.08□□□□□ -0.32
CDKN1AP38936 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 AL354989.2-201ENST00000435838 1540 ntBASIC13.08□□□□□ -0.32
CDKN1AP38936 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDKN1AP38936 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CDKN1AP38936 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 LINC02447-202ENST00000501888 2146 ntBASIC13.07□□□□□ -0.32
CDKN1AP38936 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CDKN1AP38936 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 BTBD6P1-201ENST00000412176 1267 ntBASIC13.07□□□□□ -0.32
CDKN1AP38936 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 AC007969.1-201ENST00000433675 447 ntBASIC13.07□□□□□ -0.32
CDKN1AP38936 AC006033.1-201ENST00000440505 426 ntBASIC13.07□□□□□ -0.32
CDKN1AP38936 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.07□□□□□ -0.32
CDKN1AP38936 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.07□□□□□ -0.32
CDKN1AP38936 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.07□□□□□ -0.32
CDKN1AP38936 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 RNA5SP486-201ENST00000515961 83 ntBASIC13.07□□□□□ -0.32
CDKN1AP38936 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.07□□□□□ -0.32
CDKN1AP38936 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.07□□□□□ -0.32
CDKN1AP38936 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 AL022328.3-201ENST00000607943 679 ntBASIC13.07□□□□□ -0.32
CDKN1AP38936 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.07□□□□□ -0.32
CDKN1AP38936 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CDKN1AP38936 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CDKN1AP38936 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CDKN1AP38936 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.06□□□□□ -0.32
CDKN1AP38936 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CDKN1AP38936 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CDKN1AP38936 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDKN1AP38936 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CDKN1AP38936 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.06□□□□□ -0.32
CDKN1AP38936 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms