Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPS1P31327 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.97■□□□□ 0.95
CPS1P31327 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CPS1P31327 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CPS1P31327 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CPS1P31327 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 AIRN-201ENST00000601203 4374 ntBASIC20.96■□□□□ 0.95
CPS1P31327 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC20.96■□□□□ 0.95
CPS1P31327 KRT18P36-201ENST00000411618 1276 ntBASIC20.96■□□□□ 0.95
CPS1P31327 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.96■□□□□ 0.95
CPS1P31327 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC20.96■□□□□ 0.95
CPS1P31327 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.96■□□□□ 0.95
CPS1P31327 AL157407.1-201ENST00000435784 904 ntBASIC20.96■□□□□ 0.95
CPS1P31327 AP005212.2-201ENST00000584979 510 ntBASIC20.96■□□□□ 0.95
CPS1P31327 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.96■□□□□ 0.95
CPS1P31327 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.96■□□□□ 0.95
CPS1P31327 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
CPS1P31327 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.96■□□□□ 0.95
CPS1P31327 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPS1P31327 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CPS1P31327 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.95■□□□□ 0.94
CPS1P31327 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPS1P31327 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPS1P31327 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CPS1P31327 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPS1P31327 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC20.95■□□□□ 0.94
CPS1P31327 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPS1P31327 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CPS1P31327 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 ABHD17AP9-201ENST00000561925 548 ntBASIC20.95■□□□□ 0.94
CPS1P31327 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.95■□□□□ 0.94
CPS1P31327 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CPS1P31327 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPS1P31327 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.95■□□□□ 0.94
CPS1P31327 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPS1P31327 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CPS1P31327 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.94■□□□□ 0.94
CPS1P31327 AC079328.2-201ENST00000561241 3354 ntBASIC20.94■□□□□ 0.94
CPS1P31327 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CPS1P31327 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPS1P31327 GUSBP10-201ENST00000417412 665 ntBASIC20.94■□□□□ 0.94
CPS1P31327 TLE1P1-201ENST00000422965 589 ntBASIC20.94■□□□□ 0.94
CPS1P31327 AL512306.1-201ENST00000432698 848 ntBASIC20.94■□□□□ 0.94
CPS1P31327 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 AC106047.2-201ENST00000511723 743 ntBASIC20.94■□□□□ 0.94
CPS1P31327 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.94■□□□□ 0.94
CPS1P31327 AP000322.3-201ENST00000608665 388 ntBASIC20.94■□□□□ 0.94
CPS1P31327 AC010491.1-201ENST00000563101 2797 ntBASIC20.94■□□□□ 0.94
CPS1P31327 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.94■□□□□ 0.94
CPS1P31327 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.94■□□□□ 0.94
CPS1P31327 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
CPS1P31327 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CPS1P31327 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 MIR5001-201ENST00000580185 100 ntBASIC20.94■□□□□ 0.94
CPS1P31327 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.94■□□□□ 0.94
CPS1P31327 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPS1P31327 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.94■□□□□ 0.94
CPS1P31327 AC133540.1-201ENST00000620845 1019 ntBASIC20.94■□□□□ 0.94
CPS1P31327 AL672207.1-201ENST00000328462 1570 ntBASIC20.93■□□□□ 0.94
CPS1P31327 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.93■□□□□ 0.94
CPS1P31327 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms