Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.67■■□□□ 1.06
POLR1AO95602 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC21.67■■□□□ 1.06
POLR1AO95602 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.67■■□□□ 1.06
POLR1AO95602 DUX4L47-201ENST00000566374 394 ntBASIC21.67■■□□□ 1.06
POLR1AO95602 AL109837.1-201ENST00000603272 613 ntBASIC21.67■■□□□ 1.06
POLR1AO95602 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC21.67■■□□□ 1.06
POLR1AO95602 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 AL139384.1-201ENST00000612143 3047 ntBASIC21.67■■□□□ 1.06
POLR1AO95602 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
POLR1AO95602 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
POLR1AO95602 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 FAM90A7P-201ENST00000382628 1395 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 FAM90A23P-201ENST00000400136 1395 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 MST1L-201ENST00000442552 2185 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 AC018463.1-201ENST00000456674 917 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 AC026803.1-201ENST00000569130 274 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 MIR5196-201ENST00000578146 115 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.66■■□□□ 1.06
POLR1AO95602 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.66■■□□□ 1.06
POLR1AO95602 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
POLR1AO95602 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC21.66■■□□□ 1.06
POLR1AO95602 PSMD4P1-201ENST00000433951 1109 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.66■■□□□ 1.06
POLR1AO95602 ALG1L13P-202ENST00000519320 584 ntBASIC21.66■■□□□ 1.06
POLR1AO95602 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
POLR1AO95602 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
POLR1AO95602 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1AO95602 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
POLR1AO95602 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 RN7SL258P-201ENST00000478664 300 ntBASIC21.65■■□□□ 1.06
POLR1AO95602 AL118516.1-201ENST00000564152 670 ntBASIC21.65■■□□□ 1.06
POLR1AO95602 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC21.65■■□□□ 1.06
POLR1AO95602 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC21.65■■□□□ 1.06
POLR1AO95602 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 LINC00528-201ENST00000600723 2160 ntBASIC21.65■■□□□ 1.06
POLR1AO95602 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
POLR1AO95602 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC21.65■■□□□ 1.06
POLR1AO95602 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1AO95602 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
POLR1AO95602 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC21.64■■□□□ 1.06
POLR1AO95602 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
POLR1AO95602 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
POLR1AO95602 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.64■■□□□ 1.06
POLR1AO95602 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.64■■□□□ 1.06
POLR1AO95602 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC21.64■■□□□ 1.06
POLR1AO95602 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC21.64■■□□□ 1.06
POLR1AO95602 AP003392.6-201ENST00000607709 325 ntBASIC21.64■■□□□ 1.06
POLR1AO95602 AC105137.3-201ENST00000617588 984 ntBASIC21.64■■□□□ 1.06
POLR1AO95602 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
POLR1AO95602 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC21.64■■□□□ 1.05
POLR1AO95602 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1AO95602 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1AO95602 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1AO95602 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC21.64■■□□□ 1.05
POLR1AO95602 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.64■■□□□ 1.05
POLR1AO95602 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms