Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ZNF253O75346 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12□□□□□ -0.49
ZNF253O75346 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
ZNF253O75346 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.99□□□□□ -0.49
ZNF253O75346 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ZNF253O75346 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.99□□□□□ -0.49
ZNF253O75346 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ZNF253O75346 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.99□□□□□ -0.49
ZNF253O75346 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZNF253O75346 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 AC136604.1-201ENST00000418535 575 ntBASIC11.99□□□□□ -0.49
ZNF253O75346 AL671277.1-201ENST00000429656 993 ntBASIC11.99□□□□□ -0.49
ZNF253O75346 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.99□□□□□ -0.49
ZNF253O75346 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.99□□□□□ -0.49
ZNF253O75346 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZNF253O75346 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.99□□□□□ -0.49
ZNF253O75346 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ZNF253O75346 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZNF253O75346 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
ZNF253O75346 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZNF253O75346 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF253O75346 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ZNF253O75346 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
ZNF253O75346 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF253O75346 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.98□□□□□ -0.49
ZNF253O75346 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF253O75346 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF253O75346 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms