Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AC093813.1-201ENST00000605066 256 ntBASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AC093525.8-201ENST00000624099 1342 ntBASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMX2-CTNND1H3BSU7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 KRT18P43-201ENST00000469825 1281 ntBASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AC000095.1-201ENST00000603208 874 ntBASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 MIR6869-201ENST00000619434 62 ntBASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AC134312.5-201ENST00000568031 1313 ntBASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.07■□□□□ 0
TMX2-CTNND1H3BSU7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AC099336.1-201ENST00000417053 1171 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 C2orf27AP3-201ENST00000434123 579 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 YBX1P6-201ENST00000442962 1002 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AC012441.1-201ENST00000446669 685 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 VDAC1P7-201ENST00000462417 847 ntBASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.06■□□□□ 0
TMX2-CTNND1H3BSU7 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms