Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ODF3BA8MYP8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ODF3BA8MYP8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 MIR658-201ENST00000385210 100 ntBASIC12.23□□□□□ -0.45
ODF3BA8MYP8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 KRT223P-202ENST00000449164 1292 ntBASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 LINC00528-201ENST00000600723 2160 ntBASIC12.23□□□□□ -0.45
ODF3BA8MYP8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
ODF3BA8MYP8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 FTLP10-202ENST00000505798 471 ntBASIC12.22□□□□□ -0.45
ODF3BA8MYP8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.22□□□□□ -0.45
ODF3BA8MYP8 AC008687.7-202ENST00000637404 953 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms