Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 GHSR-202ENST00000427970 912 ntBASIC15.12■□□□□ 0.01
NCDNQ9UBB6 MARK2P5-201ENST00000507649 634 ntBASIC15.12■□□□□ 0.01
NCDNQ9UBB6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 PCDHA1-201ENST00000378133 2726 ntBASIC15.12■□□□□ 0.01
NCDNQ9UBB6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 AC011270.2-201ENST00000624293 2550 ntBASIC15.12■□□□□ 0.01
NCDNQ9UBB6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCDNQ9UBB6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 ISCA2P1-201ENST00000425548 448 ntBASIC15.11■□□□□ 0.01
NCDNQ9UBB6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 PDIA3P2-201ENST00000428073 158 ntBASIC15.11■□□□□ 0.01
NCDNQ9UBB6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 AL391280.1-201ENST00000506969 1062 ntBASIC15.11■□□□□ 0.01
NCDNQ9UBB6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 AC004899.1-201ENST00000424687 1714 ntBASIC15.11■□□□□ 0.01
NCDNQ9UBB6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCDNQ9UBB6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NCDNQ9UBB6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms