Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC21.45■■□□□ 1.02
SLC52A1Q9NWF4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 LINC01165-201ENST00000445190 1623 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 AC090340.1-201ENST00000620778 4980 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 AL139384.1-201ENST00000612143 3047 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 MIR557-201ENST00000385239 98 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 CTBP2P4-201ENST00000513884 920 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 DKFZP434H168-201ENST00000567381 1905 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 AC023090.2-201ENST00000625182 2110 ntBASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC52A1Q9NWF4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 NDUFS6P1-201ENST00000485187 316 ntBASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 SALL4P5-201ENST00000419001 1760 ntBASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC52A1Q9NWF4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 AP000356.3-201ENST00000382243 753 ntBASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 RPL13AP19-201ENST00000434320 584 ntBASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms