Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 AL590640.2-201ENST00000457038 527 ntBASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 MIR4741-201ENST00000579822 90 ntBASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 AL022328.3-201ENST00000607943 679 ntBASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TM9SF3Q9HD45 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 BTBD6P1-201ENST00000412176 1267 ntBASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 AC104306.2-201ENST00000451877 341 ntBASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 AP001258.2-201ENST00000529891 490 ntBASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.29■□□□□ 0.04
TM9SF3Q9HD45 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 RNU1-114P-201ENST00000365297 166 ntBASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 KLF2P2-201ENST00000416807 1039 ntBASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.28■□□□□ 0.04
TM9SF3Q9HD45 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms