Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 AC023024.2-201ENST00000623561 1993 ntBASIC14.53□□□□□ -0.08
TUBA1CQ9BQE3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TUBA1CQ9BQE3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC002472.2-201ENST00000442739 958 ntBASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC245100.5-201ENST00000452108 331 ntBASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AL365330.1-201ENST00000607459 531 ntBASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBA1CQ9BQE3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AC022144.1-201ENST00000602255 1580 ntBASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AL080243.2-201ENST00000418783 582 ntBASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms