Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SMOQ99835 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 MIR1202-201ENST00000408529 83 ntBASIC15.95■□□□□ 0.14
SMOQ99835 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.95■□□□□ 0.14
SMOQ99835 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.95■□□□□ 0.14
SMOQ99835 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.95■□□□□ 0.14
SMOQ99835 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SMOQ99835 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.95■□□□□ 0.14
SMOQ99835 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.95■□□□□ 0.14
SMOQ99835 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.95■□□□□ 0.14
SMOQ99835 AC079316.1-201ENST00000548397 411 ntBASIC15.95■□□□□ 0.14
SMOQ99835 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.95■□□□□ 0.14
SMOQ99835 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.95■□□□□ 0.14
SMOQ99835 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.95■□□□□ 0.14
SMOQ99835 AC008687.7-202ENST00000637404 953 ntBASIC15.95■□□□□ 0.14
SMOQ99835 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.95■□□□□ 0.14
SMOQ99835 ZBED1P1-201ENST00000502364 1930 ntBASIC15.95■□□□□ 0.14
SMOQ99835 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 ACE3P-201ENST00000423435 1973 ntBASIC15.95■□□□□ 0.14
SMOQ99835 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 CLUHP2-201ENST00000426660 1303 ntBASIC15.94■□□□□ 0.14
SMOQ99835 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
SMOQ99835 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 AC007274.1-201ENST00000439805 662 ntBASIC15.94■□□□□ 0.14
SMOQ99835 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.94■□□□□ 0.14
SMOQ99835 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.94■□□□□ 0.14
SMOQ99835 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.94■□□□□ 0.14
SMOQ99835 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
SMOQ99835 AGAP7P-201ENST00000582299 2062 ntBASIC15.94■□□□□ 0.14
SMOQ99835 AGAP14-201ENST00000624701 2060 ntBASIC15.94■□□□□ 0.14
SMOQ99835 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
SMOQ99835 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SMOQ99835 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.94■□□□□ 0.14
SMOQ99835 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
SMOQ99835 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SMOQ99835 AHCYP2-201ENST00000430630 1300 ntBASIC15.94■□□□□ 0.14
SMOQ99835 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SMOQ99835 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SMOQ99835 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SMOQ99835 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.93■□□□□ 0.14
SMOQ99835 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms