Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 MIR557-201ENST00000385239 98 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 LYPLA2P1-203ENST00000447689 696 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 CHCHD2P9-201ENST00000461726 456 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 TMCO5B-205ENST00000530020 894 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 C2orf69P1-201ENST00000563532 1093 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 AL022344.2-201ENST00000568976 968 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 AC105137.3-201ENST00000617588 984 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 AC138466.4-201ENST00000623965 852 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 AC073911.3-201ENST00000624401 631 ntBASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM43Q96BQ3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AL138725.1-201ENST00000407347 1314 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 ALG1L6P-201ENST00000515248 758 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 ALG1L13P-202ENST00000519320 584 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AP003398.1-201ENST00000531124 318 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AC107464.3-201ENST00000609172 737 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AC005618.3-201ENST00000624928 458 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM43Q96BQ3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 LINC01165-201ENST00000445190 1623 ntBASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM43Q96BQ3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms