Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 AC011270.2-201ENST00000624293 2550 ntBASIC16.19■□□□□ 0.18
UBA3Q8TBC4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 CU639417.3-201ENST00000624240 1404 ntBASIC16.19■□□□□ 0.18
UBA3Q8TBC4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBA3Q8TBC4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 ZBED1P1-201ENST00000502364 1930 ntBASIC16.18■□□□□ 0.18
UBA3Q8TBC4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 HLA-K-203ENST00000430151 1046 ntBASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC012645.4-201ENST00000610691 1061 ntBASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.18■□□□□ 0.18
UBA3Q8TBC4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBA3Q8TBC4 TNRC18P2-201ENST00000417666 2714 ntBASIC16.18■□□□□ 0.18
UBA3Q8TBC4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 TMEM14DP-201ENST00000422205 345 ntBASIC16.17■□□□□ 0.18
UBA3Q8TBC4 ACTG1P3-201ENST00000431775 1114 ntBASIC16.17■□□□□ 0.18
UBA3Q8TBC4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBA3Q8TBC4 MIR5189-201ENST00000577370 114 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms