Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 AC008738.7-201ENST00000609744 511 ntBASIC18■□□□□ 0.47
CCDC83Q8IWF9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC83Q8IWF9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18■□□□□ 0.47
CCDC83Q8IWF9 AC097359.2-201ENST00000604992 2389 ntBASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 AL391069.4-201ENST00000609583 481 ntBASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 LILRP1-201ENST00000444199 1370 ntBASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC83Q8IWF9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 MEIS3P1-201ENST00000495167 958 ntBASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC004790.1-201ENST00000612686 536 ntBASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC139530.3-201ENST00000620344 690 ntBASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 AC007787.1-201ENST00000588095 1583 ntBASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC83Q8IWF9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC83Q8IWF9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC83Q8IWF9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms