Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AL157414.3-201ENST00000624276 1954 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 PCDHA14-201ENST00000506751 2298 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 AC092127.1-201ENST00000567093 3455 ntBASIC14.85□□□□□ -0.03
LYSMD4Q5XG99 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 AC009779.1-201ENST00000551138 283 ntBASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 AC073352.2-201ENST00000609385 439 ntBASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 AC103691.2-201ENST00000618824 433 ntBASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LYSMD4Q5XG99 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 AC009093.2-202ENST00000620513 2079 ntBASIC14.83□□□□□ -0.03
LYSMD4Q5XG99 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 AC011840.2-201ENST00000563063 1520 ntBASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 AC026316.1-201ENST00000398900 414 ntBASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 AC098935.1-201ENST00000446057 611 ntBASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 MIR4754-201ENST00000582477 89 ntBASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LYSMD4Q5XG99 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms