Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.4□□□□□ -0.42
CX3CL1P78423 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.4□□□□□ -0.42
CX3CL1P78423 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.4□□□□□ -0.42
CX3CL1P78423 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CX3CL1P78423 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.4□□□□□ -0.42
CX3CL1P78423 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CX3CL1P78423 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
CX3CL1P78423 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CX3CL1P78423 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CX3CL1P78423 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CX3CL1P78423 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CX3CL1P78423 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CX3CL1P78423 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 AC084364.1-201ENST00000551967 1556 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 C18orf15-201ENST00000623680 2534 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 AL390755.1-201ENST00000623716 2027 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
CX3CL1P78423 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.39□□□□□ -0.43
CX3CL1P78423 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 KRT18P43-201ENST00000469825 1281 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 MEIS3P1-201ENST00000495167 958 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 SRD5A3P1-201ENST00000603021 949 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CX3CL1P78423 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.39□□□□□ -0.43
CX3CL1P78423 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CX3CL1P78423 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CX3CL1P78423 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.38□□□□□ -0.43
CX3CL1P78423 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CX3CL1P78423 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 AL121723.1-201ENST00000445194 1519 ntBASIC12.38□□□□□ -0.43
CX3CL1P78423 AC112693.3-201ENST00000624819 1983 ntBASIC12.38□□□□□ -0.43
CX3CL1P78423 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.38□□□□□ -0.43
CX3CL1P78423 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CX3CL1P78423 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CX3CL1P78423 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.38□□□□□ -0.43
CX3CL1P78423 RPL5P21-201ENST00000404620 815 ntBASIC12.38□□□□□ -0.43
CX3CL1P78423 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.38□□□□□ -0.43
CX3CL1P78423 SPDYE18-201ENST00000510091 1050 ntBASIC12.38□□□□□ -0.43
CX3CL1P78423 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms