Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLK1P49759 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLK1P49759 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLK1P49759 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLK1P49759 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CLK1P49759 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLK1P49759 AC092127.1-201ENST00000567093 3455 ntBASIC14.49□□□□□ -0.09
CLK1P49759 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CLK1P49759 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CLK1P49759 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 AC041040.2-201ENST00000622926 2899 ntBASIC14.48□□□□□ -0.09
CLK1P49759 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.48□□□□□ -0.09
CLK1P49759 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CLK1P49759 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 SPDYE17-201ENST00000412399 783 ntBASIC14.48□□□□□ -0.09
CLK1P49759 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 EEF1DP4-201ENST00000446006 880 ntBASIC14.48□□□□□ -0.09
CLK1P49759 AC067863.1-201ENST00000494933 530 ntBASIC14.48□□□□□ -0.09
CLK1P49759 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.48□□□□□ -0.09
CLK1P49759 AC004449.1-201ENST00000564240 433 ntBASIC14.48□□□□□ -0.09
CLK1P49759 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 MIR6080-201ENST00000617359 66 ntBASIC14.48□□□□□ -0.09
CLK1P49759 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 PEG13-201ENST00000631594 5667 ntBASIC14.48□□□□□ -0.09
CLK1P49759 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLK1P49759 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLK1P49759 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLK1P49759 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLK1P49759 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CLK1P49759 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.47□□□□□ -0.09
CLK1P49759 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CLK1P49759 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.47□□□□□ -0.09
CLK1P49759 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.47□□□□□ -0.09
CLK1P49759 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.47□□□□□ -0.09
CLK1P49759 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.47□□□□□ -0.09
CLK1P49759 MIR4453-201ENST00000584019 89 ntBASIC14.47□□□□□ -0.09
CLK1P49759 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms