Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.11■□□□□ 0.65
COL15A1P39059 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.11■□□□□ 0.65
COL15A1P39059 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
COL15A1P39059 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.11■□□□□ 0.65
COL15A1P39059 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.11■□□□□ 0.65
COL15A1P39059 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL15A1P39059 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.11■□□□□ 0.65
COL15A1P39059 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.11■□□□□ 0.65
COL15A1P39059 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
COL15A1P39059 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.11■□□□□ 0.65
COL15A1P39059 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.11■□□□□ 0.65
COL15A1P39059 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.11■□□□□ 0.65
COL15A1P39059 AL353770.1-201ENST00000614915 403 ntBASIC19.11■□□□□ 0.65
COL15A1P39059 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
COL15A1P39059 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.11■□□□□ 0.65
COL15A1P39059 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 AL157791.1-201ENST00000553667 1699 ntBASIC19.11■□□□□ 0.65
COL15A1P39059 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COL15A1P39059 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL15A1P39059 AC087481.3-201ENST00000602886 1894 ntBASIC19.11■□□□□ 0.65
COL15A1P39059 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 AC006480.2-201ENST00000609770 1337 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.1■□□□□ 0.65
COL15A1P39059 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.1■□□□□ 0.65
COL15A1P39059 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.1■□□□□ 0.65
COL15A1P39059 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COL15A1P39059 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.1■□□□□ 0.65
COL15A1P39059 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.1■□□□□ 0.65
COL15A1P39059 AC069218.1-201ENST00000435269 762 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.1■□□□□ 0.65
COL15A1P39059 AC020922.3-201ENST00000595064 547 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.1■□□□□ 0.65
COL15A1P39059 AL136295.7-201ENST00000619226 1200 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 AL353726.2-201ENST00000623259 884 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COL15A1P39059 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 PRAL-201ENST00000624952 3286 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 SSR4P1-203ENST00000599569 2260 ntBASIC19.1■□□□□ 0.65
COL15A1P39059 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.1■□□□□ 0.65
COL15A1P39059 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.1■□□□□ 0.65
COL15A1P39059 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL15A1P39059 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
COL15A1P39059 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 CEP164P1-201ENST00000455142 418 ntBASIC19.09■□□□□ 0.65
COL15A1P39059 RCC2P8-201ENST00000502779 1035 ntBASIC19.09■□□□□ 0.65
COL15A1P39059 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.09■□□□□ 0.65
COL15A1P39059 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.09■□□□□ 0.65
COL15A1P39059 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.09■□□□□ 0.65
COL15A1P39059 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
COL15A1P39059 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 AC132192.2-201ENST00000596206 1147 ntBASIC19.09■□□□□ 0.65
COL15A1P39059 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.09■□□□□ 0.65
COL15A1P39059 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
COL15A1P39059 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.09■□□□□ 0.65
COL15A1P39059 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.09■□□□□ 0.65
COL15A1P39059 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 MROH4P-201ENST00000431302 1578 ntBASIC19.09■□□□□ 0.65
COL15A1P39059 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL15A1P39059 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms