Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
RHOP08100 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.7■□□□□ 0.1
RHOP08100 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RHOP08100 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RHOP08100 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.7■□□□□ 0.1
RHOP08100 AC104073.2-201ENST00000453737 312 ntBASIC15.7■□□□□ 0.1
RHOP08100 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.7■□□□□ 0.1
RHOP08100 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.7■□□□□ 0.1
RHOP08100 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.7■□□□□ 0.1
RHOP08100 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 AC100827.2-201ENST00000563214 1194 ntBASIC15.7■□□□□ 0.1
RHOP08100 MIR4783-201ENST00000580343 82 ntBASIC15.7■□□□□ 0.1
RHOP08100 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RHOP08100 AC026740.1-201ENST00000607068 791 ntBASIC15.7■□□□□ 0.1
RHOP08100 AC138696.2-201ENST00000607376 223 ntBASIC15.7■□□□□ 0.1
RHOP08100 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.7■□□□□ 0.1
RHOP08100 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 AL162426.1-201ENST00000624141 743 ntBASIC15.7■□□□□ 0.1
RHOP08100 AC100757.4-201ENST00000626934 759 ntBASIC15.7■□□□□ 0.1
RHOP08100 AC009093.2-202ENST00000620513 2079 ntBASIC15.7■□□□□ 0.1
RHOP08100 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.7■□□□□ 0.1
RHOP08100 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.7■□□□□ 0.1
RHOP08100 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.7■□□□□ 0.1
RHOP08100 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RHOP08100 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.69■□□□□ 0.1
RHOP08100 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RHOP08100 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.69■□□□□ 0.1
RHOP08100 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.69■□□□□ 0.1
RHOP08100 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RHOP08100 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RHOP08100 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.69■□□□□ 0.1
RHOP08100 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RHOP08100 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.69■□□□□ 0.1
RHOP08100 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.69■□□□□ 0.1
RHOP08100 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.69■□□□□ 0.1
RHOP08100 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 AC009955.4-201ENST00000597192 544 ntBASIC15.69■□□□□ 0.1
RHOP08100 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.69■□□□□ 0.1
RHOP08100 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RHOP08100 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RHOP08100 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RHOP08100 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.69■□□□□ 0.1
RHOP08100 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.69■□□□□ 0.1
RHOP08100 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RHOP08100 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RHOP08100 AC011840.2-201ENST00000563063 1520 ntBASIC15.68■□□□□ 0.1
RHOP08100 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
RHOP08100 SHC1P1-201ENST00000425230 1745 ntBASIC15.68■□□□□ 0.1
RHOP08100 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHOP08100 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
RHOP08100 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.68■□□□□ 0.1
RHOP08100 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RHOP08100 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHOP08100 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.68■□□□□ 0.1
RHOP08100 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RHOP08100 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.68■□□□□ 0.1
RHOP08100 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHOP08100 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RHOP08100 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RHOP08100 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms