Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.12□□□□□ -0.15
THBS1P07996 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 TERF1P3-201ENST00000505638 1227 ntBASIC14.12□□□□□ -0.15
THBS1P07996 SPDYE18-201ENST00000510091 1050 ntBASIC14.12□□□□□ -0.15
THBS1P07996 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.12□□□□□ -0.15
THBS1P07996 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.12□□□□□ -0.15
THBS1P07996 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.12□□□□□ -0.15
THBS1P07996 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.12□□□□□ -0.15
THBS1P07996 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
THBS1P07996 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.12□□□□□ -0.15
THBS1P07996 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
THBS1P07996 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
THBS1P07996 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 AL360270.3-201ENST00000609118 1348 ntBASIC14.12□□□□□ -0.15
THBS1P07996 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.12□□□□□ -0.15
THBS1P07996 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
THBS1P07996 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
THBS1P07996 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.11□□□□□ -0.15
THBS1P07996 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.11□□□□□ -0.15
THBS1P07996 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 AL645937.2-201ENST00000396808 931 ntBASIC14.11□□□□□ -0.15
THBS1P07996 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.11□□□□□ -0.15
THBS1P07996 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.11□□□□□ -0.15
THBS1P07996 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.11□□□□□ -0.15
THBS1P07996 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.11□□□□□ -0.15
THBS1P07996 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.11□□□□□ -0.15
THBS1P07996 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 AC008761.3-201ENST00000624803 892 ntBASIC14.11□□□□□ -0.15
THBS1P07996 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.11□□□□□ -0.15
THBS1P07996 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
THBS1P07996 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
THBS1P07996 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
THBS1P07996 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
THBS1P07996 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
THBS1P07996 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
THBS1P07996 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
THBS1P07996 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 DRD5P1-201ENST00000456605 1438 ntBASIC14.1□□□□□ -0.15
THBS1P07996 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
THBS1P07996 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.1□□□□□ -0.15
THBS1P07996 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.1□□□□□ -0.15
THBS1P07996 AL589987.1-201ENST00000453380 819 ntBASIC14.1□□□□□ -0.15
THBS1P07996 FAM86LP-201ENST00000478302 853 ntBASIC14.1□□□□□ -0.15
THBS1P07996 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.1□□□□□ -0.15
THBS1P07996 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.1□□□□□ -0.15
THBS1P07996 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.1□□□□□ -0.15
THBS1P07996 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
THBS1P07996 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
THBS1P07996 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms