Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM3O75382 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM3O75382 DGCR5-201ENST00000399539 862 ntBASIC14.34□□□□□ -0.11
TRIM3O75382 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
TRIM3O75382 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 MYCLP2-201ENST00000449268 967 ntBASIC14.34□□□□□ -0.11
TRIM3O75382 RN7SL399P-201ENST00000471648 279 ntBASIC14.34□□□□□ -0.11
TRIM3O75382 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM3O75382 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
TRIM3O75382 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
TRIM3O75382 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRIM3O75382 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 AC106881.1-201ENST00000605849 3329 ntBASIC14.34□□□□□ -0.11
TRIM3O75382 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM3O75382 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRIM3O75382 AP002414.2-201ENST00000591780 3365 ntBASIC14.34□□□□□ -0.11
TRIM3O75382 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM3O75382 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM3O75382 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM3O75382 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 AC098614.1-201ENST00000368528 745 ntBASIC14.33□□□□□ -0.12
TRIM3O75382 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 AC098850.1-201ENST00000419919 790 ntBASIC14.33□□□□□ -0.12
TRIM3O75382 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM3O75382 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.33□□□□□ -0.12
TRIM3O75382 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
TRIM3O75382 WASH4P-201ENST00000564273 1246 ntBASIC14.33□□□□□ -0.12
TRIM3O75382 AC036164.1-201ENST00000570544 333 ntBASIC14.33□□□□□ -0.12
TRIM3O75382 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.33□□□□□ -0.12
TRIM3O75382 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM3O75382 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.33□□□□□ -0.12
TRIM3O75382 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 AC087481.3-201ENST00000602886 1894 ntBASIC14.33□□□□□ -0.12
TRIM3O75382 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM3O75382 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRIM3O75382 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM3O75382 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM3O75382 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRIM3O75382 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms