Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC026471.1-201ENST00000564629 3026 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AL360270.3-201ENST00000609118 1348 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 AL157414.3-201ENST00000624276 1954 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 TMBIM7P-202ENST00000641474 1516 ntBASIC17.37■□□□□ 0.37
TMEM88BA6NKF7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AC090340.1-201ENST00000620778 4980 ntBASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 MIR1301-201ENST00000408518 82 ntBASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 RN7SL357P-201ENST00000581065 298 ntBASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88BA6NKF7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AC092171.3-201ENST00000610122 2651 ntBASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AC106047.2-201ENST00000511723 743 ntBASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 NAV1-210ENST00000593583 726 ntBASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 AC007250.1-201ENST00000608934 338 ntBASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88BA6NKF7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms