Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 CICP11-201ENST00000434745 2827 ntBASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 AC046158.3-201ENST00000624947 2558 ntBASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 REXO1L5P-201ENST00000622260 2098 ntBASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3FA6NER0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC015818.8-201ENST00000587907 1519 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 MIR1247-201ENST00000408206 136 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC007969.1-201ENST00000433675 447 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC006033.1-201ENST00000440505 426 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CNN2P10-201ENST00000443067 918 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 COX5BP1-201ENST00000507622 393 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 MIR3615-201ENST00000581999 87 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 AC055811.4-201ENST00000624039 1754 ntBASIC15.19■□□□□ 0.02
TBC1D3FA6NER0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 MIR600HG-201ENST00000449175 5984 ntBASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 GPAA1P2-201ENST00000417923 928 ntBASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 BCYRN1-201ENST00000418539 200 ntBASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3FA6NER0 AL591846.1-201ENST00000451736 433 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms